WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56A11.1 Sequence Name  F56A11.1
Length (nt)  3789   Chromosome Location  IV: 572776-572820
Chromosome . Primary Identifier  IV Chromosome Location . Start  572776
Chromosome Location . End  572820
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A11.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31351 GEX-2 145.0 1262 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00113992
WBRNAi00114071
WBRNAi00078854
WBRNAi00077393
WBRNAi00108182
WBRNAi00008872
WBRNAi00048573
WBRNAi00025690
WBRNAi00101889
WBRNAi00084963
WBRNAi00032909
WBRNAi00114265
WBRNAi00114030
WBRNAi00114109
WBRNAi00114188
WBRNAi00114229
WBRNAi00077543
WBRNAi00114150
WBRNAi00078867
WBRNAi00078871
WBRNAi00077544
WBRNAi00077391
WBRNAi00092369
WBRNAi00092371
WBRNAi00092373
WBRNAi00092375
WBRNAi00082934
WBRNAi00082943
WBRNAi00082946
WBRNAi00078859

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56A11.1 572776 572820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001579 gex-2 F56A11.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56A11.1 572776 572820 1
CDS:F56A11.1 572868 572938 1
CDS:F56A11.1 572988 573078 1
CDS:F56A11.1 573134 573313 1
CDS:F56A11.1 576048 576229 1
CDS:F56A11.1 576288 576408 1
CDS:F56A11.1 576975 577293 1
CDS:F56A11.1 577536 579650 1
CDS:F56A11.1 579863 580074 1
CDS:F56A11.1 580138 580268 1
CDS:F56A11.1 582335 582482 1
CDS:F56A11.1 583178 583351 1

1 Sequence

Length
3789

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56A11.1.1 F56A11.1.1 4022   IV: 572769-583577