WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A12.4 Sequence Name  T05A12.4
Length (nt)  4869   Chromosome Location  IV: 6888981-6889007
Chromosome . Primary Identifier  IV Chromosome Location . Start  6888981
Chromosome Location . End  6889007
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A12.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37666 T05A12.4 187.5 1622 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00094780
WBRNAi00001161
WBRNAi00052439
WBRNAi00052440
WBRNAi00018178
WBRNAi00019024
WBRNAi00076646
WBRNAi00035811
WBRNAi00075542
WBRNAi00081603
WBRNAi00064107

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A12.4 6888981 6889007 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020235 T05A12.4 T05A12.4 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A12.4 6888981 6889007 1
CDS:T05A12.4 6889055 6889204 1
CDS:T05A12.4 6889252 6889400 1
CDS:T05A12.4 6889446 6889632 1
CDS:T05A12.4 6889681 6889826 1
CDS:T05A12.4 6889870 6889989 1
CDS:T05A12.4 6890167 6890476 1
CDS:T05A12.4 6890532 6890813 1
CDS:T05A12.4 6890871 6890994 1
CDS:T05A12.4 6891530 6892036 1
CDS:T05A12.4 6892506 6892739 1
CDS:T05A12.4 6892785 6893467 1
CDS:T05A12.4 6893780 6893854 1
CDS:T05A12.4 6893905 6894273 1
CDS:T05A12.4 6894788 6894957 1
CDS:T05A12.4 6895007 6895177 1
CDS:T05A12.4 6895698 6896009 1
CDS:T05A12.4 6896054 6896173 1
CDS:T05A12.4 6896660 6896792 1
CDS:T05A12.4 6896838 6897047 1
CDS:T05A12.4 6897095 6897326 1
CDS:T05A12.4 6897371 6897528 1

1 Sequence

Length
4869

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A12.4.1 T05A12.4.1 5375   IV: 6887948-6897783
Transcript:T05A12.4.2 T05A12.4.2 5138   IV: 6888967-6897783