WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11A8.7j Sequence Name  R11A8.7j
Length (nt)  7809   Chromosome Location  IV: 10374946-10375059
Chromosome . Primary Identifier  IV Chromosome Location . Start  10374946
Chromosome Location . End  10375059
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.7j

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49960 MASK-1, isoform j 285.4 2602 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00002410
WBRNAi00051770
WBRNAi00051771
WBRNAi00017740

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11A8.7j 10374946 10375059 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011240 mask-1 R11A8.7 Caenorhabditis elegans

24 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11A8.7j 10374946 10375059 1
CDS:R11A8.7j 10375110 10375277 1
CDS:R11A8.7j 10375324 10375493 1
CDS:R11A8.7j 10375870 10375988 1
CDS:R11A8.7j 10376326 10376450 1
CDS:R11A8.7j 10376506 10376895 1
CDS:R11A8.7j 10377480 10377955 1
CDS:R11A8.7j 10378006 10378612 1
CDS:R11A8.7j 10378657 10378799 1
CDS:R11A8.7j 10379249 10379760 1
CDS:R11A8.7j 10379905 10380194 1
CDS:R11A8.7j 10380496 10380667 1
CDS:R11A8.7j 10381447 10381578 1
CDS:R11A8.7j 10381659 10381807 1
CDS:R11A8.7j 10381861 10382516 1
CDS:R11A8.7j 10382569 10382869 1
CDS:R11A8.7j 10382925 10383824 1
CDS:R11A8.7j 10384030 10384333 1
CDS:R11A8.7j 10384400 10384729 1
CDS:R11A8.7j 10384777 10385405 1
CDS:R11A8.7j 10385457 10385975 1
CDS:R11A8.7j 10386027 10386203 1
CDS:R11A8.7j 10386272 10386600 1
CDS:R11A8.7j 10386646 10386742 1

1 Sequence

Length
7809

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11A8.7j.1 R11A8.7j.1 7809   IV: 10374946-10386742