WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00002410 Remark  yk397d7
Secondary Identifier  SA:yk397d7

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011240 mask-1 R11A8.7 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.7b R11A8.7b 7797   IV: 10374946-10375059
CDS:R11A8.7i R11A8.7i 7815   IV: 10374946-10375059
CDS:R11A8.7j R11A8.7j 7809   IV: 10374946-10375059
CDS:R11A8.7h R11A8.7h 4458   IV: 10381518-10381578
CDS:R11A8.7c R11A8.7c 4218   IV: 10381885-10382516
CDS:R11A8.7a R11A8.7a 7863   IV: 10374946-10375059
CDS:R11A8.7d R11A8.7d 4284   IV: 10381885-10382516
CDS:R11A8.7e R11A8.7e 4452   IV: 10381518-10381578
CDS:R11A8.7f R11A8.7f 7869   IV: 10374946-10375059
CDS:R11A8.7g R11A8.7g 7803   IV: 10374946-10375059

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain