WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A8.7h.2 Sequence Name  R11A8.7h.2
Length (nt)  5101   Chromosome Location  IV: 10381441-10387308
Chromosome . Primary Identifier  IV Chromosome Location . Start  10381441
Chromosome Location . End  10387308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.7h.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011240 mask-1 R11A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.7h R11A8.7h 4458   IV: 10381518-10381578

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.7h.2 10381441 10387308 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141159   138   IV: 10381441-10381578 Caenorhabditis elegans
Exon141171   155   IV: 10381653-10381807 Caenorhabditis elegans
Exon141183   656   IV: 10381861-10382516 Caenorhabditis elegans
Exon141196   301   IV: 10382569-10382869 Caenorhabditis elegans
Exon141207   900   IV: 10382925-10383824 Caenorhabditis elegans
Exon141215   304   IV: 10384030-10384333 Caenorhabditis elegans
Exon141226   330   IV: 10384400-10384729 Caenorhabditis elegans
Exon141237   629   IV: 10384777-10385405 Caenorhabditis elegans
Exon141248   519   IV: 10385457-10385975 Caenorhabditis elegans
Exon141259   177   IV: 10386027-10386203 Caenorhabditis elegans
Exon141270   329   IV: 10386272-10386600 Caenorhabditis elegans
Exon141278   663   IV: 10386646-10387308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.7h.2 10381441 10387308 1

1 Sequence

Length
5101

1 Sequence Ontology Term

Identifier Name Description
transcript