WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11A8.7h Sequence Name  R11A8.7h
Length (nt)  4458   Chromosome Location  IV: 10381518-10381578
Chromosome . Primary Identifier  IV Chromosome Location . Start  10381518
Chromosome Location . End  10381578
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.7h

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48120 MASK-1, isoform h 162.0 1485 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002410
WBRNAi00051770
WBRNAi00051771

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R11A8.7h 10381518 10381578 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011240 mask-1 R11A8.7 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R11A8.7h 10381518 10381578 1
CDS:R11A8.7h 10381653 10381807 1
CDS:R11A8.7h 10381861 10382516 1
CDS:R11A8.7h 10382569 10382869 1
CDS:R11A8.7h 10382925 10383824 1
CDS:R11A8.7h 10384030 10384333 1
CDS:R11A8.7h 10384400 10384729 1
CDS:R11A8.7h 10384777 10385405 1
CDS:R11A8.7h 10385457 10385975 1
CDS:R11A8.7h 10386027 10386203 1
CDS:R11A8.7h 10386272 10386600 1
CDS:R11A8.7h 10386646 10386742 1

1 Sequence

Length
4458

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11A8.7h.1 R11A8.7h.1 8423   IV: 10374905-10387309
Transcript:R11A8.7h.2 R11A8.7h.2 5101   IV: 10381441-10387308