WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M7.5 Sequence Name  M7.5
Length (nt)  1944   Chromosome Location  IV: 11078818-11079018
Chromosome . Primary Identifier  IV Chromosome Location . Start  11078818
Chromosome Location . End  11079018
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M7.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18887 ATG-7 72.4 647 Caenorhabditis elegans
 

Other

35 RNAi

WormBase ID
WBRNAi00107843
WBRNAi00107846
WBRNAi00107840
WBRNAi00107848
WBRNAi00107837
WBRNAi00078272
WBRNAi00091344
WBRNAi00086923
WBRNAi00002249
WBRNAi00051055
WBRNAi00007539
WBRNAi00017269
WBRNAi00076585
WBRNAi00102815
WBRNAi00034489
WBRNAi00108422
WBRNAi00097953
WBRNAi00092332
WBRNAi00092331
WBRNAi00092223
WBRNAi00079861
WBRNAi00065567
WBRNAi00065568
WBRNAi00108421
WBRNAi00108423
WBRNAi00099130
WBRNAi00080466
WBRNAi00115689
WBRNAi00094570
WBRNAi00094573

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M7.5 11078818 11079018 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010882 atg-7 M7.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:M7.5 11078818 11079018 -1
CDS:M7.5 11079068 11079238 -1
CDS:M7.5 11079291 11079884 -1
CDS:M7.5 11079928 11080458 -1
CDS:M7.5 11080509 11080661 -1
CDS:M7.5 11080708 11080874 -1
CDS:M7.5 11080924 11081050 -1

1 Sequence

Length
1944

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M7.5.1 M7.5.1 2085   IV: 11078682-11081055