WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F8.1a.1 Sequence Name  C08F8.1a.1
Length (nt)  464   Chromosome Location  IV: 11150113-11150930
Chromosome . Primary Identifier  IV Chromosome Location . Start  11150113
Chromosome Location . End  11150930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007443 pfd-1 C08F8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F8.1a C08F8.1a 354   IV: 11150115-11150222

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F8.1a.1 11150113 11150930 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143649   110   IV: 11150113-11150222 Caenorhabditis elegans
Exon143650   146   IV: 11150525-11150670 Caenorhabditis elegans
Exon143653   208   IV: 11150723-11150930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F8.1a.1 11150113 11150930 1

1 Sequence

Length
464

1 Sequence Ontology Term

Identifier Name Description
transcript