WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C08F8.1a Sequence Name  C08F8.1a
Length (nt)  354   Chromosome Location  IV: 11150115-11150222
Chromosome . Primary Identifier  IV Chromosome Location . Start  11150115
Chromosome Location . End  11150222
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05248 PFD-1, isoform a 13.9 117 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00028689
WBRNAi00040126
WBRNAi00024507
WBRNAi00040125
WBRNAi00000775
WBRNAi00008373
WBRNAi00069156
WBRNAi00105759
WBRNAi00105754
WBRNAi00105756
WBRNAi00105755
WBRNAi00105758
WBRNAi00105757
WBRNAi00105760
WBRNAi00105762
WBRNAi00105761
WBRNAi00105764
WBRNAi00105763
WBRNAi00105766
WBRNAi00105765
WBRNAi00105768
WBRNAi00105767
WBRNAi00105770
WBRNAi00105769
WBRNAi00105772
WBRNAi00105771
WBRNAi00105774
WBRNAi00105773
WBRNAi00105776
WBRNAi00105775

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C08F8.1a 11150115 11150222 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007443 pfd-1 C08F8.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C08F8.1a 11150115 11150222 1
CDS:C08F8.1a 11150525 11150670 1
CDS:C08F8.1a 11150723 11150822 1

1 Sequence

Length
354

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C08F8.1a.1 C08F8.1a.1 464   IV: 11150113-11150930