WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28D1.10 Sequence Name  F28D1.10
Length (nt)  3426   Chromosome Location  IV: 12404435-12404546
Chromosome . Primary Identifier  IV Chromosome Location . Start  12404435
Chromosome Location . End  12404546
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D1.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05750 GEX-3 129.9 1141 Caenorhabditis elegans
 

Other

41 RNAi

WormBase ID
WBRNAi00107861
WBRNAi00107864
WBRNAi00108183
WBRNAi00025297
WBRNAi00064712
WBRNAi00008713
WBRNAi00045825
WBRNAi00068373
WBRNAi00068372
WBRNAi00068375
WBRNAi00068374
WBRNAi00064681
WBRNAi00064827
WBRNAi00068861
WBRNAi00068860
WBRNAi00071871
WBRNAi00071482
WBRNAi00000308
WBRNAi00114610
WBRNAi00064643
WBRNAi00111948
WBRNAi00078862
WBRNAi00065719
WBRNAi00077545
WBRNAi00078868
WBRNAi00082939
WBRNAi00077392
WBRNAi00092370
WBRNAi00092372
WBRNAi00092374

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28D1.10 12404435 12404546 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001580 gex-3 F28D1.10 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28D1.10 12404435 12404546 1
CDS:F28D1.10 12404597 12404697 1
CDS:F28D1.10 12404744 12404893 1
CDS:F28D1.10 12404964 12405335 1
CDS:F28D1.10 12405385 12405433 1
CDS:F28D1.10 12405490 12405703 1
CDS:F28D1.10 12405756 12406065 1
CDS:F28D1.10 12406116 12406857 1
CDS:F28D1.10 12406916 12407140 1
CDS:F28D1.10 12407192 12408013 1
CDS:F28D1.10 12408063 12408175 1
CDS:F28D1.10 12408225 12408440 1

1 Sequence

Length
3426

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28D1.10.1 F28D1.10.1 3680   IV: 12404431-12408690