WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y37A1C.1f Sequence Name  Y37A1C.1f
Length (nt)  3561   Chromosome Location  IV: 14108149-14108284
Chromosome . Primary Identifier  IV Chromosome Location . Start  14108149
Chromosome Location . End  14108284
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1C.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47205 NKCC-1, isoform f 131.9 1186 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00001780
WBRNAi00001796
WBRNAi00047919
WBRNAi00055861
WBRNAi00015367
WBRNAi00020210
WBRNAi00032583
WBRNAi00036780
WBRNAi00103375

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y37A1C.1f 14108149 14108284 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012543 nkcc-1 Y37A1C.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y37A1C.1f 14108149 14108284 -1
CDS:Y37A1C.1f 14108342 14108754 -1
CDS:Y37A1C.1f 14109105 14109177 -1
CDS:Y37A1C.1f 14109226 14109409 -1
CDS:Y37A1C.1f 14110635 14110870 -1
CDS:Y37A1C.1f 14110916 14111181 -1
CDS:Y37A1C.1f 14111793 14112262 -1
CDS:Y37A1C.1f 14112539 14112770 -1
CDS:Y37A1C.1f 14112915 14113411 -1
CDS:Y37A1C.1f 14113464 14113647 -1
CDS:Y37A1C.1f 14114280 14114591 -1
CDS:Y37A1C.1f 14114971 14115342 -1
CDS:Y37A1C.1f 14115407 14115550 -1
CDS:Y37A1C.1f 14115601 14115642 -1

1 Sequence

Length
3561

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y37A1C.1f.1 Y37A1C.1f.1 4063   IV: 14107720-14115715