WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105C5B.21h Sequence Name  Y105C5B.21h
Length (nt)  3042   Chromosome Location  IV: 15998129-15998405
Chromosome . Primary Identifier  IV Chromosome Location . Start  15998129
Chromosome Location . End  15998405
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.21h

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49998 JAC-1, isoform h 111.9 1013 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00055199
WBRNAi00036476
WBRNAi00080604
WBRNAi00101414
WBRNAi00092918
WBRNAi00101432

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105C5B.21h 15998129 15998405 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002175 jac-1 Y105C5B.21 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105C5B.21h 15998129 15998405 -1
CDS:Y105C5B.21h 15998926 15999094 -1
CDS:Y105C5B.21h 15999150 15999314 -1
CDS:Y105C5B.21h 15999764 16000867 -1
CDS:Y105C5B.21h 16001755 16001934 -1
CDS:Y105C5B.21h 16002467 16002898 -1
CDS:Y105C5B.21h 16004382 16004562 -1
CDS:Y105C5B.21h 16005253 16005590 -1
CDS:Y105C5B.21h 16005925 16006050 -1
CDS:Y105C5B.21h 16006274 16006343 -1

1 Sequence

Length
3042

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105C5B.21h.1 Y105C5B.21h.1 3350   IV: 15997835-16006357