WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C39F7.2b Sequence Name  C39F7.2b
Length (nt)  2256   Chromosome Location  V: 1224046-1224139
Chromosome . Primary Identifier  V Chromosome Location . Start  1224046
Chromosome Location . End  1224139
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39F7.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42345 MADD-2, isoform b 82.3 751 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00011796
WBRNAi00011797
WBRNAi00042229
WBRNAi00020824
WBRNAi00080808
WBRNAi00076206
WBRNAi00065292

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C39F7.2b 1224046 1224139 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016539 madd-2 C39F7.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C39F7.2b 1224046 1224139 -1
CDS:C39F7.2b 1224937 1225036 -1
CDS:C39F7.2b 1225084 1225285 -1
CDS:C39F7.2b 1225642 1225905 -1
CDS:C39F7.2b 1225962 1226107 -1
CDS:C39F7.2b 1226958 1227114 -1
CDS:C39F7.2b 1227352 1227681 -1
CDS:C39F7.2b 1233212 1233271 -1
CDS:C39F7.2b 1233320 1233446 -1
CDS:C39F7.2b 1233762 1234197 -1
CDS:C39F7.2b 1234910 1235017 -1
CDS:C39F7.2b 1235203 1235434 -1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C39F7.2b.1 C39F7.2b.1 2426   V: 1223897-1235455