WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37C3.6a.2 Sequence Name  C37C3.6a.2
Length (nt)  7907   Chromosome Location  V: 7827290-7842384
Chromosome . Primary Identifier  V Chromosome Location . Start  7827290
Chromosome Location . End  7842384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37C3.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003242 mig-6 C37C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37C3.6a C37C3.6a 4677   V: 7827300-7827395

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.6a.2 7827290 7842384 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188440   106   V: 7827290-7827395 Caenorhabditis elegans
Exon188442   215   V: 7827451-7827665 Caenorhabditis elegans
Exon188446   156   V: 7828167-7828322 Caenorhabditis elegans
Exon188450   152   V: 7828370-7828521 Caenorhabditis elegans
Exon188454   757   V: 7828572-7829328 Caenorhabditis elegans
Exon188458   232   V: 7829453-7829684 Caenorhabditis elegans
Exon188462   122   V: 7829763-7829884 Caenorhabditis elegans
Exon188466   1585   V: 7829936-7831520 Caenorhabditis elegans
Exon188470   784   V: 7831588-7832371 Caenorhabditis elegans
Exon188474   213   V: 7832446-7832658 Caenorhabditis elegans
Exon188479   1816   V: 7832981-7834796 Caenorhabditis elegans
Exon188483   351   V: 7834847-7835197 Caenorhabditis elegans
Exon188487   79   V: 7835280-7835358 Caenorhabditis elegans
Exon188499   92   V: 7840437-7840528 Caenorhabditis elegans
Exon188502   589   V: 7840926-7841514 Caenorhabditis elegans
Exon188505   658   V: 7841727-7842384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.6a.2 7827290 7842384 1

1 Sequence

Length
7907

1 Sequence Ontology Term

Identifier Name Description
transcript