WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C37C3.6a Sequence Name  C37C3.6a
Length (nt)  4677   Chromosome Location  V: 7827300-7827395
Chromosome . Primary Identifier  V Chromosome Location . Start  7827300
Chromosome Location . End  7827395
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37C3.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17535 MIG-6, isoform a 169.6 1558 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00042109
WBRNAi00024770
WBRNAi00008496
WBRNAi00029638
WBRNAi00099779
WBRNAi00100369
WBRNAi00078091
WBRNAi00064061
WBRNAi00064062
WBRNAi00078088
WBRNAi00100743
WBRNAi00099173
WBRNAi00071546
WBRNAi00099577
WBRNAi00099375
WBRNAi00079666
WBRNAi00065701
WBRNAi00110302
WBRNAi00079482
WBRNAi00079804
WBRNAi00079620
WBRNAi00100930
WBRNAi00065788
WBRNAi00106863
WBRNAi00079758
WBRNAi00070170
WBRNAi00100556
WBRNAi00079574
WBRNAi00100182
WBRNAi00079712

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C37C3.6a 7827300 7827395 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003242 mig-6 C37C3.6 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C37C3.6a 7827300 7827395 1
CDS:C37C3.6a 7827451 7827665 1
CDS:C37C3.6a 7828167 7828322 1
CDS:C37C3.6a 7828370 7828521 1
CDS:C37C3.6a 7828572 7829328 1
CDS:C37C3.6a 7829453 7829684 1
CDS:C37C3.6a 7829763 7829884 1
CDS:C37C3.6a 7829936 7831520 1
CDS:C37C3.6a 7831588 7832371 1
CDS:C37C3.6a 7832446 7832658 1
CDS:C37C3.6a 7832981 7833345 1

1 Sequence

Length
4677

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C37C3.6a.1 C37C3.6a.1 7965   V: 7827232-7842384
Transcript:C37C3.6a.2 C37C3.6a.2 7907   V: 7827290-7842384