WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1j.1 Sequence Name  H39E23.1j.1
Length (nt)  4366   Chromosome Location  V: 14112039-14141119
Chromosome . Primary Identifier  V Chromosome Location . Start  14112039
Chromosome Location . End  14141119 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1j H39E23.1j 3603   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1j.1 14112039 14141119 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206369   877   V: 14112039-14112915 Caenorhabditis elegans
Exon206390   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206404   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206430   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206445   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206462   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206486   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206504   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206507   168   V: 14121345-14121512 Caenorhabditis elegans
Exon206534   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206549   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206564   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206582   215   V: 14131640-14131854 Caenorhabditis elegans
Exon206586   102   V: 14132840-14132941 Caenorhabditis elegans
Exon206590   69   V: 14133227-14133295 Caenorhabditis elegans
Exon206597   30   V: 14141090-14141119 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1j.1 14112039 14141119 -1

1 Sequence

Length
4366

1 Sequence Ontology Term

Identifier Name Description
transcript