WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C1.4.1 Sequence Name  C44C1.4.1
Length (nt)  1881   Chromosome Location  X: 970583-974848
Chromosome . Primary Identifier  X Chromosome Location . Start  970583
Chromosome Location . End  974848 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016643 vps-45 C44C1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C1.4 C44C1.4 1644   X: 970724-970775

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C1.4.1 970583 974848 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223241   193   X: 970583-970775 Caenorhabditis elegans
Exon223242   150   X: 970965-971114 Caenorhabditis elegans
Exon223243   123   X: 971161-971283 Caenorhabditis elegans
Exon223244   107   X: 971635-971741 Caenorhabditis elegans
Exon223245   93   X: 971791-971883 Caenorhabditis elegans
Exon223246   90   X: 972405-972494 Caenorhabditis elegans
Exon223247   496   X: 972542-973037 Caenorhabditis elegans
Exon223248   176   X: 973608-973783 Caenorhabditis elegans
Exon223249   65   X: 973958-974022 Caenorhabditis elegans
Exon223250   199   X: 974070-974268 Caenorhabditis elegans
Exon223251   189   X: 974660-974848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C1.4.1 970583 974848 -1

1 Sequence

Length
1881

1 Sequence Ontology Term

Identifier Name Description
transcript