WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H42K12.3.3 Sequence Name  H42K12.3.3
Length (nt)  1844   Chromosome Location  X: 1311391-1316638
Chromosome . Primary Identifier  X Chromosome Location . Start  1311391
Chromosome Location . End  1316638 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H42K12.3.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019272 H42K12.3 H42K12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H42K12.3 H42K12.3 1569   X: 1311621-1311690

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H42K12.3.3 1311391 1316638 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223918   149   X: 1311391-1311539 Caenorhabditis elegans
Exon223919   86   X: 1311605-1311690 Caenorhabditis elegans
Exon223924   125   X: 1312534-1312658 Caenorhabditis elegans
Exon223927   154   X: 1312708-1312861 Caenorhabditis elegans
Exon223930   140   X: 1312989-1313128 Caenorhabditis elegans
Exon223933   133   X: 1313173-1313305 Caenorhabditis elegans
Exon223936   219   X: 1313366-1313584 Caenorhabditis elegans
Exon223939   302   X: 1314340-1314641 Caenorhabditis elegans
Exon223942   145   X: 1314686-1314830 Caenorhabditis elegans
Exon223945   155   X: 1315259-1315413 Caenorhabditis elegans
Exon223946   236   X: 1316403-1316638 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H42K12.3.3 1311391 1316638 1

1 Sequence

Length
1844

1 Sequence Ontology Term

Identifier Name Description
transcript