WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H42K12.3 Sequence Name  H42K12.3
Length (nt)  1569   Chromosome Location  X: 1311621-1311690
Chromosome . Primary Identifier  X Chromosome Location . Start  1311621
Chromosome Location . End  1311690
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H42K12.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11614 H42K12.3 58.7 522 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00049560
WBRNAi00016354

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H42K12.3 1311621 1311690 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019272 H42K12.3 H42K12.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:H42K12.3 1311621 1311690 1
CDS:H42K12.3 1312534 1312658 1
CDS:H42K12.3 1312708 1312861 1
CDS:H42K12.3 1312989 1313128 1
CDS:H42K12.3 1313173 1313305 1
CDS:H42K12.3 1313366 1313584 1
CDS:H42K12.3 1314340 1314641 1
CDS:H42K12.3 1314686 1314830 1
CDS:H42K12.3 1315259 1315413 1
CDS:H42K12.3 1316403 1316528 1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H42K12.3.3 H42K12.3.3 1844   X: 1311391-1316638
Transcript:H42K12.3.1 H42K12.3.1 1697   X: 1311605-1316640
Transcript:H42K12.3.2 H42K12.3.2 1694   X: 1311608-1316640