WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H42K12.3.1 Sequence Name  H42K12.3.1
Length (nt)  1697   Chromosome Location  X: 1311605-1316640
Chromosome . Primary Identifier  X Chromosome Location . Start  1311605
Chromosome Location . End  1316640 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H42K12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019272 H42K12.3 H42K12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H42K12.3 H42K12.3 1569   X: 1311621-1311690

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H42K12.3.1 1311605 1316640 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223920   86   X: 1311605-1311690 Caenorhabditis elegans
Exon223922   125   X: 1312534-1312658 Caenorhabditis elegans
Exon223925   154   X: 1312708-1312861 Caenorhabditis elegans
Exon223928   140   X: 1312989-1313128 Caenorhabditis elegans
Exon223931   133   X: 1313173-1313305 Caenorhabditis elegans
Exon223934   219   X: 1313366-1313584 Caenorhabditis elegans
Exon223937   302   X: 1314340-1314641 Caenorhabditis elegans
Exon223940   145   X: 1314686-1314830 Caenorhabditis elegans
Exon223943   155   X: 1315259-1315413 Caenorhabditis elegans
Exon223947   238   X: 1316403-1316640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H42K12.3.1 1311605 1316640 1

1 Sequence

Length
1697

1 Sequence Ontology Term

Identifier Name Description
transcript