WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A9.1e.1 Sequence Name  K06A9.1e.1
Length (nt)  4863   Chromosome Location  X: 1547509-1559728
Chromosome . Primary Identifier  X Chromosome Location . Start  1547509
Chromosome Location . End  1559728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A9.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019435 kola-1 K06A9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A9.1e K06A9.1e 4863   X: 1547509-1547620

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.1e.1 1547509 1559728 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224258   112   X: 1547509-1547620 Caenorhabditis elegans
Exon224265   113   X: 1547671-1547783 Caenorhabditis elegans
Exon224272   84   X: 1547833-1547916 Caenorhabditis elegans
Exon224279   86   X: 1547963-1548048 Caenorhabditis elegans
Exon224286   78   X: 1548105-1548182 Caenorhabditis elegans
Exon224293   191   X: 1548234-1548424 Caenorhabditis elegans
Exon224299   3615   X: 1548473-1552087 Caenorhabditis elegans
Exon224308   30   X: 1558455-1558484 Caenorhabditis elegans
Exon224315   80   X: 1558758-1558837 Caenorhabditis elegans
Exon224322   194   X: 1558881-1559074 Caenorhabditis elegans
Exon224329   78   X: 1559118-1559195 Caenorhabditis elegans
Exon224336   80   X: 1559477-1559556 Caenorhabditis elegans
Exon224341   122   X: 1559607-1559728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.1e.1 1547509 1559728 1

1 Sequence

Length
4863

1 Sequence Ontology Term

Identifier Name Description
transcript