WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198023 Gene Name  T14F9.13
Sequence Name  ? T14F9.13 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position 
Length (nt)  ? 144
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198023

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T14F9.13 T14F9.13 144   X: 2226844-2226987
 

Other

0 CDSs

0 RNAi Result

5 Allele

Public Name
gk963725
gk963864
gk577912
gk388303
gk852284

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00198023 2226844 2226987 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_2226621..2226843   223 X: 2226621-2226843 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated
  Transcripts that showed significantly increased expression in N2 day 10 adults comparing to in N2 day 1 adult animals according to Illumina RNASeq. DESeq fold change > 2, FDR < 0.05. WBPaper00067499:Day10_vs_Day1_upregulated_Illumina

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00198023 2226844 2226987 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
144

1 Sequence Ontology Term