WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10H10.1.1 Sequence Name  T10H10.1.1
Length (nt)  6598   Chromosome Location  X: 2303082-2314914
Chromosome . Primary Identifier  X Chromosome Location . Start  2303082
Chromosome Location . End  2314914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10H10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002039 hum-6 T10H10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10H10.1 T10H10.1 6297   X: 2303121-2303138

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T10H10.1.1 2303082 2314914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225446   57   X: 2303082-2303138 Caenorhabditis elegans
Exon225447   111   X: 2303195-2303305 Caenorhabditis elegans
Exon225448   147   X: 2303493-2303639 Caenorhabditis elegans
Exon225449   185   X: 2303687-2303871 Caenorhabditis elegans
Exon225450   215   X: 2304406-2304620 Caenorhabditis elegans
Exon225451   164   X: 2304664-2304827 Caenorhabditis elegans
Exon225452   410   X: 2304873-2305282 Caenorhabditis elegans
Exon225453   166   X: 2305328-2305493 Caenorhabditis elegans
Exon225454   1020   X: 2305543-2306562 Caenorhabditis elegans
Exon225455   123   X: 2306606-2306728 Caenorhabditis elegans
Exon225456   102   X: 2308146-2308247 Caenorhabditis elegans
Exon225457   273   X: 2308293-2308565 Caenorhabditis elegans
Exon225458   305   X: 2308852-2309156 Caenorhabditis elegans
Exon225459   430   X: 2309208-2309637 Caenorhabditis elegans
Exon225460   149   X: 2309682-2309830 Caenorhabditis elegans
Exon225461   79   X: 2310410-2310488 Caenorhabditis elegans
Exon225462   171   X: 2310539-2310709 Caenorhabditis elegans
Exon225463   242   X: 2310760-2311001 Caenorhabditis elegans
Exon225464   170   X: 2311060-2311229 Caenorhabditis elegans
Exon225465   188   X: 2311276-2311463 Caenorhabditis elegans
Exon225466   122   X: 2311512-2311633 Caenorhabditis elegans
Exon225467   129   X: 2311685-2311813 Caenorhabditis elegans
Exon225468   345   X: 2312526-2312870 Caenorhabditis elegans
Exon225469   79   X: 2312918-2312996 Caenorhabditis elegans
Exon225470   744   X: 2313164-2313907 Caenorhabditis elegans
Exon225471   114   X: 2313952-2314065 Caenorhabditis elegans
Exon225472   358   X: 2314557-2314914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T10H10.1.1 2303082 2314914 1

1 Sequence

Length
6598

1 Sequence Ontology Term

Identifier Name Description
transcript