WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24D8.1a.1 Sequence Name  T24D8.1a.1
Length (nt)  1652   Chromosome Location  X: 2360126-2364822
Chromosome . Primary Identifier  X Chromosome Location . Start  2360126
Chromosome Location . End  2364822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24D8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020767 lgc-40 T24D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24D8.1a T24D8.1a 1485   X: 2360126-2360288

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24D8.1a.1 2360126 2364822 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225523   163   X: 2360126-2360288 Caenorhabditis elegans
Exon225526   54   X: 2360673-2360726 Caenorhabditis elegans
Exon225530   170   X: 2361135-2361304 Caenorhabditis elegans
Exon225534   75   X: 2361470-2361544 Caenorhabditis elegans
Exon225538   433   X: 2361598-2362030 Caenorhabditis elegans
Exon225543   44   X: 2362089-2362132 Caenorhabditis elegans
Exon225549   168   X: 2362183-2362350 Caenorhabditis elegans
Exon225551   122   X: 2364057-2364178 Caenorhabditis elegans
Exon225555   91   X: 2364226-2364316 Caenorhabditis elegans
Exon225562   332   X: 2364491-2364822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24D8.1a.1 2360126 2364822 1

1 Sequence

Length
1652

1 Sequence Ontology Term

Identifier Name Description
transcript