WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.5.1 Sequence Name  K09C4.5.1
Length (nt)  1698   Chromosome Location  X: 3282631-3285721
Chromosome . Primary Identifier  X Chromosome Location . Start  3282631
Chromosome Location . End  3285721 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019550 K09C4.5 K09C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.5 K09C4.5 1575   X: 3282674-3282843

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.5.1 3282631 3285721 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228106   213   X: 3282631-3282843 Caenorhabditis elegans
Exon228107   120   X: 3282889-3283008 Caenorhabditis elegans
Exon228108   164   X: 3283057-3283220 Caenorhabditis elegans
Exon228109   52   X: 3283265-3283316 Caenorhabditis elegans
Exon228110   75   X: 3283514-3283588 Caenorhabditis elegans
Exon228111   125   X: 3283634-3283758 Caenorhabditis elegans
Exon228112   95   X: 3283812-3283906 Caenorhabditis elegans
Exon228113   111   X: 3283947-3284057 Caenorhabditis elegans
Exon228114   116   X: 3284104-3284219 Caenorhabditis elegans
Exon228115   80   X: 3284267-3284346 Caenorhabditis elegans
Exon228116   113   X: 3284910-3285022 Caenorhabditis elegans
Exon228117   134   X: 3285073-3285206 Caenorhabditis elegans
Exon228118   73   X: 3285255-3285327 Caenorhabditis elegans
Exon228119   45   X: 3285378-3285422 Caenorhabditis elegans
Exon228120   54   X: 3285483-3285536 Caenorhabditis elegans
Exon228121   128   X: 3285594-3285721 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.5.1 3282631 3285721 1

1 Sequence

Length
1698

1 Sequence Ontology Term

Identifier Name Description
transcript