WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B2.4b.1 Sequence Name  T22B2.4b.1
Length (nt)  1330   Chromosome Location  X: 3904584-3907673
Chromosome . Primary Identifier  X Chromosome Location . Start  3904584
Chromosome Location . End  3907673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B2.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006321 sup-12 T22B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B2.4b T22B2.4b 456   X: 3904639-3904720

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B2.4b.1 3904584 3907673 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229621   137   X: 3904584-3904720 Caenorhabditis elegans
Exon229625   158   X: 3904914-3905071 Caenorhabditis elegans
Exon229628   130   X: 3905491-3905620 Caenorhabditis elegans
Exon229631   70   X: 3905809-3905878 Caenorhabditis elegans
Exon229633   46   X: 3906139-3906184 Caenorhabditis elegans
Exon229636   161   X: 3906814-3906974 Caenorhabditis elegans
Exon229639   628   X: 3907046-3907673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B2.4b.1 3904584 3907673 1

1 Sequence

Length
1330

1 Sequence Ontology Term

Identifier Name Description
transcript