WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T22B2.4b Sequence Name  T22B2.4b
Length (nt)  456   Chromosome Location  X: 3904639-3904720
Chromosome . Primary Identifier  X Chromosome Location . Start  3904639
Chromosome Location . End  3904720
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B2.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42801 SUP-12, isoform b 16.3 151 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00053785
WBRNAi00062575
WBRNAi00035785
WBRNAi00062574

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T22B2.4b 3904639 3904720 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006321 sup-12 T22B2.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T22B2.4b 3904639 3904720 1
CDS:T22B2.4b 3904914 3905071 1
CDS:T22B2.4b 3905491 3905620 1
CDS:T22B2.4b 3905809 3905878 1
CDS:T22B2.4b 3906139 3906154 1

1 Sequence

Length
456

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T22B2.4b.1 T22B2.4b.1 1330   X: 3904584-3907673
Transcript:T22B2.4b.2 T22B2.4b.2 1938   X: 3904589-3907657