WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R02E12.2a Sequence Name  R02E12.2a
Length (nt)  1911   Chromosome Location  X: 4012230-4012947
Chromosome . Primary Identifier  X Chromosome Location . Start  4012230
Chromosome Location . End  4012947
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02E12.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28410 MOP-25.1, isoform a 72.3 636 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00051137
WBRNAi00051138
WBRNAi00017324
WBRNAi00017325
WBRNAi00034535
WBRNAi00086457
WBRNAi00086459
WBRNAi00062325
WBRNAi00093975
WBRNAi00093927
WBRNAi00086458
WBRNAi00093891
WBRNAi00112234
WBRNAi00098409
WBRNAi00098413
WBRNAi00098416

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R02E12.2a 4012230 4012947 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019827 mop-25.1 R02E12.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R02E12.2a 4012230 4012947 1
CDS:R02E12.2a 4019247 4019416 1
CDS:R02E12.2a 4019602 4019927 1
CDS:R02E12.2a 4019980 4020215 1
CDS:R02E12.2a 4020811 4021082 1
CDS:R02E12.2a 4021272 4021460 1

1 Sequence

Length
1911

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R02E12.2a.1 R02E12.2a.1 2663   X: 4012219-4022201