WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A8.1.1 Sequence Name  C24A8.1.1
Length (nt)  2079   Chromosome Location  X: 4320863-4327331
Chromosome . Primary Identifier  X Chromosome Location . Start  4320863
Chromosome Location . End  4327331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016037 dop-6 C24A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A8.1 C24A8.1 2079   X: 4320863-4321045

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C24A8.1.1 4320863 4327331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230464   183   X: 4320863-4321045 Caenorhabditis elegans
Exon230465   66   X: 4321093-4321158 Caenorhabditis elegans
Exon230467   113   X: 4321209-4321321 Caenorhabditis elegans
Exon230468   298   X: 4321367-4321664 Caenorhabditis elegans
Exon230469   79   X: 4321721-4321799 Caenorhabditis elegans
Exon230470   113   X: 4321856-4321968 Caenorhabditis elegans
Exon230471   66   X: 4322923-4322988 Caenorhabditis elegans
Exon230472   110   X: 4323057-4323166 Caenorhabditis elegans
Exon230473   172   X: 4323228-4323399 Caenorhabditis elegans
Exon230474   141   X: 4324989-4325129 Caenorhabditis elegans
Exon230475   97   X: 4325530-4325626 Caenorhabditis elegans
Exon230476   170   X: 4325676-4325845 Caenorhabditis elegans
Exon230477   98   X: 4326165-4326262 Caenorhabditis elegans
Exon230478   72   X: 4326309-4326380 Caenorhabditis elegans
Exon230479   105   X: 4326730-4326834 Caenorhabditis elegans
Exon230480   90   X: 4327087-4327176 Caenorhabditis elegans
Exon230481   106   X: 4327226-4327331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C24A8.1.1 4320863 4327331 1

1 Sequence

Length
2079

1 Sequence Ontology Term

Identifier Name Description
transcript