WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25F6.1.1 Sequence Name  F25F6.1.1
Length (nt)  2995   Chromosome Location  X: 4441738-4448383
Chromosome . Primary Identifier  X Chromosome Location . Start  4441738
Chromosome Location . End  4448383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25F6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017794 mltn-13 F25F6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F6.1 F25F6.1 2340   X: 4442161-4442388

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25F6.1.1 4441738 4448383 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230788   651   X: 4441738-4442388 Caenorhabditis elegans
Exon230789   336   X: 4442436-4442771 Caenorhabditis elegans
Exon230790   105   X: 4442822-4442926 Caenorhabditis elegans
Exon230791   236   X: 4443200-4443435 Caenorhabditis elegans
Exon230792   95   X: 4443494-4443588 Caenorhabditis elegans
Exon230793   179   X: 4443631-4443809 Caenorhabditis elegans
Exon230794   150   X: 4443860-4444009 Caenorhabditis elegans
Exon230795   103   X: 4444059-4444161 Caenorhabditis elegans
Exon230800   115   X: 4444719-4444833 Caenorhabditis elegans
Exon230802   90   X: 4445134-4445223 Caenorhabditis elegans
Exon230803   529   X: 4445274-4445802 Caenorhabditis elegans
Exon230804   134   X: 4447733-4447866 Caenorhabditis elegans
Exon230805   272   X: 4448112-4448383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25F6.1.1 4441738 4448383 -1

1 Sequence

Length
2995

1 Sequence Ontology Term

Identifier Name Description
transcript