WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.4a.1 Sequence Name  F32A6.4a.1
Length (nt)  2264   Chromosome Location  X: 5289728-5303600
Chromosome . Primary Identifier  X Chromosome Location . Start  5289728
Chromosome Location . End  5303600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.4a F32A6.4a 1740   X: 5290111-5290223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4a.1 5289728 5303600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233234   496   X: 5289728-5290223 Caenorhabditis elegans
Exon233242   119   X: 5290283-5290401 Caenorhabditis elegans
Exon233255   124   X: 5290547-5290670 Caenorhabditis elegans
Exon233266   175   X: 5291681-5291855 Caenorhabditis elegans
Exon233277   105   X: 5292671-5292775 Caenorhabditis elegans
Exon233288   93   X: 5292982-5293074 Caenorhabditis elegans
Exon233298   161   X: 5293576-5293736 Caenorhabditis elegans
Exon233308   104   X: 5295579-5295682 Caenorhabditis elegans
Exon233316   116   X: 5295729-5295844 Caenorhabditis elegans
Exon233322   124   X: 5296640-5296763 Caenorhabditis elegans
Exon233327   146   X: 5296812-5296957 Caenorhabditis elegans
Exon233334   136   X: 5297565-5297700 Caenorhabditis elegans
Exon233339   151   X: 5297748-5297898 Caenorhabditis elegans
Exon233345   87   X: 5297954-5298040 Caenorhabditis elegans
Exon233361   127   X: 5303474-5303600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4a.1 5289728 5303600 -1

1 Sequence

Length
2264

1 Sequence Ontology Term

Identifier Name Description
transcript