WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03F11.3.1 Sequence Name  C03F11.3.1
Length (nt)  1769   Chromosome Location  X: 5397699-5400584
Chromosome . Primary Identifier  X Chromosome Location . Start  5397699
Chromosome Location . End  5400584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03F11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015389 scav-1 C03F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03F11.3 C03F11.3 1692   X: 5397762-5397841

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03F11.3.1 5397699 5400584 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233618   143   X: 5397699-5397841 Caenorhabditis elegans
Exon233619   229   X: 5397899-5398127 Caenorhabditis elegans
Exon233620   211   X: 5398173-5398383 Caenorhabditis elegans
Exon233621   178   X: 5398482-5398659 Caenorhabditis elegans
Exon233622   65   X: 5398704-5398768 Caenorhabditis elegans
Exon233623   143   X: 5398819-5398961 Caenorhabditis elegans
Exon233624   135   X: 5399006-5399140 Caenorhabditis elegans
Exon233625   105   X: 5399188-5399292 Caenorhabditis elegans
Exon233626   134   X: 5399893-5400026 Caenorhabditis elegans
Exon233627   104   X: 5400069-5400172 Caenorhabditis elegans
Exon233628   176   X: 5400218-5400393 Caenorhabditis elegans
Exon233629   146   X: 5400439-5400584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03F11.3.1 5397699 5400584 -1

1 Sequence

Length
1769

1 Sequence Ontology Term

Identifier Name Description
transcript