WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25F6.3.1 Sequence Name  C25F6.3.1
Length (nt)  3345   Chromosome Location  X: 5467870-5472683
Chromosome . Primary Identifier  X Chromosome Location . Start  5467870
Chromosome Location . End  5472683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25F6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016103 dpyd-1 C25F6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25F6.3 C25F6.3 3180   X: 5467872-5467946

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25F6.3.1 5467870 5472683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233814   77   X: 5467870-5467946 Caenorhabditis elegans
Exon233815   114   X: 5468164-5468277 Caenorhabditis elegans
Exon233816   89   X: 5468324-5468412 Caenorhabditis elegans
Exon233817   250   X: 5469054-5469303 Caenorhabditis elegans
Exon233818   469   X: 5469353-5469821 Caenorhabditis elegans
Exon233819   173   X: 5469871-5470043 Caenorhabditis elegans
Exon233820   128   X: 5470091-5470218 Caenorhabditis elegans
Exon233821   83   X: 5470282-5470364 Caenorhabditis elegans
Exon233822   152   X: 5470512-5470663 Caenorhabditis elegans
Exon233823   618   X: 5470712-5471329 Caenorhabditis elegans
Exon233824   732   X: 5471393-5472124 Caenorhabditis elegans
Exon233825   134   X: 5472171-5472304 Caenorhabditis elegans
Exon233826   326   X: 5472358-5472683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25F6.3.1 5467870 5472683 1

1 Sequence

Length
3345

1 Sequence Ontology Term

Identifier Name Description
transcript