WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.1b.1 Sequence Name  F14D12.1b.1
Length (nt)  2690   Chromosome Location  X: 5603796-5609133
Chromosome . Primary Identifier  X Chromosome Location . Start  5603796
Chromosome Location . End  5609133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017463 soc-3 F14D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.1b F14D12.1b 2493   X: 5603796-5603870

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F14D12.1b.1 5603796 5609133 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234466   75   X: 5603796-5603870 Caenorhabditis elegans
Exon234469   142   X: 5604274-5604415 Caenorhabditis elegans
Exon234470   129   X: 5604462-5604590 Caenorhabditis elegans
Exon234471   89   X: 5604636-5604724 Caenorhabditis elegans
Exon234472   255   X: 5604771-5605025 Caenorhabditis elegans
Exon234473   125   X: 5605105-5605229 Caenorhabditis elegans
Exon234474   212   X: 5605313-5605524 Caenorhabditis elegans
Exon234475   102   X: 5605969-5606070 Caenorhabditis elegans
Exon234476   115   X: 5606123-5606237 Caenorhabditis elegans
Exon234477   196   X: 5606306-5606501 Caenorhabditis elegans
Exon234478   120   X: 5606551-5606670 Caenorhabditis elegans
Exon234479   129   X: 5606719-5606847 Caenorhabditis elegans
Exon234480   139   X: 5606901-5607039 Caenorhabditis elegans
Exon234481   175   X: 5607087-5607261 Caenorhabditis elegans
Exon234482   133   X: 5607993-5608125 Caenorhabditis elegans
Exon234483   112   X: 5608309-5608420 Caenorhabditis elegans
Exon234484   47   X: 5608475-5608521 Caenorhabditis elegans
Exon234485   87   X: 5608682-5608768 Caenorhabditis elegans
Exon234486   308   X: 5608826-5609133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F14D12.1b.1 5603796 5609133 1

1 Sequence

Length
2690

1 Sequence Ontology Term

Identifier Name Description
transcript