WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F14D12.1b Sequence Name  F14D12.1b
Length (nt)  2493   Chromosome Location  X: 5603796-5603870
Chromosome . Primary Identifier  X Chromosome Location . Start  5603796
Chromosome Location . End  5603870
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54618 SOC-3, isoform b 92.8 830 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00044583
WBRNAi00013262

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F14D12.1b 5603796 5603870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017463 soc-3 F14D12.1 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:F14D12.1b 5603796 5603870 1
CDS:F14D12.1b 5604274 5604415 1
CDS:F14D12.1b 5604462 5604590 1
CDS:F14D12.1b 5604636 5604724 1
CDS:F14D12.1b 5604771 5605025 1
CDS:F14D12.1b 5605105 5605229 1
CDS:F14D12.1b 5605313 5605524 1
CDS:F14D12.1b 5605969 5606070 1
CDS:F14D12.1b 5606123 5606237 1
CDS:F14D12.1b 5606306 5606501 1
CDS:F14D12.1b 5606551 5606670 1
CDS:F14D12.1b 5606719 5606847 1
CDS:F14D12.1b 5606901 5607039 1
CDS:F14D12.1b 5607087 5607261 1
CDS:F14D12.1b 5607993 5608125 1
CDS:F14D12.1b 5608309 5608420 1
CDS:F14D12.1b 5608475 5608521 1
CDS:F14D12.1b 5608682 5608768 1
CDS:F14D12.1b 5608826 5608936 1

1 Sequence

Length
2493

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F14D12.1b.1 F14D12.1b.1 2690   X: 5603796-5609133