WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T22B7.1a Sequence Name  T22B7.1a
Length (nt)  1413   Chromosome Location  X: 5668321-5668464
Chromosome . Primary Identifier  X Chromosome Location . Start  5668321
Chromosome Location . End  5668464
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28487 EGL-13, isoform a 52.3 470 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00089858
WBRNAi00053792
WBRNAi00053793
WBRNAi00026443
WBRNAi00027490
WBRNAi00019006
WBRNAi00019457
WBRNAi00069478
WBRNAi00027865
WBRNAi00065338
WBRNAi00090488
WBRNAi00090394
WBRNAi00090233
WBRNAi00090075
WBRNAi00089915
WBRNAi00090535
WBRNAi00090441

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T22B7.1a 5668321 5668464 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T22B7.1a 5668321 5668464 1
CDS:T22B7.1a 5669687 5669769 1
CDS:T22B7.1a 5671373 5671465 1
CDS:T22B7.1a 5671534 5671600 1
CDS:T22B7.1a 5671657 5671740 1
CDS:T22B7.1a 5672228 5672357 1
CDS:T22B7.1a 5672409 5672678 1
CDS:T22B7.1a 5672728 5672946 1
CDS:T22B7.1a 5673019 5673248 1
CDS:T22B7.1a 5673294 5673386 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T22B7.1a.1 T22B7.1a.1 2169   X: 5663837-5674067
Transcript:T22B7.1a.3 T22B7.1a.3 2220   X: 5666111-5674067
Transcript:T22B7.1a.2 T22B7.1a.2 2073   X: 5668320-5674045