WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C8.6.2 Sequence Name  W01C8.6.2
Length (nt)  2002   Chromosome Location  X: 5705690-5710737
Chromosome . Primary Identifier  X Chromosome Location . Start  5705690
Chromosome Location . End  5710737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C8.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000295 cat-1 W01C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C8.6 W01C8.6 1662   X: 5705931-5706156

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.6.2 5705690 5710737 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234756   467   X: 5705690-5706156 Caenorhabditis elegans
Exon234759   166   X: 5706205-5706370 Caenorhabditis elegans
Exon234761   116   X: 5706413-5706528 Caenorhabditis elegans
Exon234763   175   X: 5707223-5707397 Caenorhabditis elegans
Exon234765   102   X: 5707514-5707615 Caenorhabditis elegans
Exon234767   183   X: 5707666-5707848 Caenorhabditis elegans
Exon234771   143   X: 5709693-5709835 Caenorhabditis elegans
Exon234773   189   X: 5709878-5710066 Caenorhabditis elegans
Exon234775   158   X: 5710122-5710279 Caenorhabditis elegans
Exon234777   95   X: 5710332-5710426 Caenorhabditis elegans
Exon234778   143   X: 5710477-5710619 Caenorhabditis elegans
Exon234780   65   X: 5710673-5710737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.6.2 5705690 5710737 -1

1 Sequence

Length
2002

1 Sequence Ontology Term

Identifier Name Description
transcript