WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C8.6.1 Sequence Name  W01C8.6.1
Length (nt)  1943   Chromosome Location  X: 5705690-5710625
Chromosome . Primary Identifier  X Chromosome Location . Start  5705690
Chromosome Location . End  5710625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000295 cat-1 W01C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C8.6 W01C8.6 1662   X: 5705931-5706156

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.6.1 5705690 5710625 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234757   467   X: 5705690-5706156 Caenorhabditis elegans
Exon234758   166   X: 5706205-5706370 Caenorhabditis elegans
Exon234760   116   X: 5706413-5706528 Caenorhabditis elegans
Exon234762   175   X: 5707223-5707397 Caenorhabditis elegans
Exon234764   102   X: 5707514-5707615 Caenorhabditis elegans
Exon234766   183   X: 5707666-5707848 Caenorhabditis elegans
Exon234770   143   X: 5709693-5709835 Caenorhabditis elegans
Exon234772   189   X: 5709878-5710066 Caenorhabditis elegans
Exon234774   158   X: 5710122-5710279 Caenorhabditis elegans
Exon234776   95   X: 5710332-5710426 Caenorhabditis elegans
Exon234779   149   X: 5710477-5710625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.6.1 5705690 5710625 -1

1 Sequence

Length
1943

1 Sequence Ontology Term

Identifier Name Description
transcript