WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E10.2a Sequence Name  F49E10.2a
Length (nt)  2373   Chromosome Location  X: 5890457-5890607
Chromosome . Primary Identifier  X Chromosome Location . Start  5890457
Chromosome Location . End  5890607
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E10.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07263 F49E10.2, isoform a 88.9 790 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047832
WBRNAi00015301
WBRNAi00032526

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F49E10.2a 5890457 5890607 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018640 F49E10.2 F49E10.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F49E10.2a 5890457 5890607 1
CDS:F49E10.2a 5890664 5890788 1
CDS:F49E10.2a 5890858 5891109 1
CDS:F49E10.2a 5891155 5891331 1
CDS:F49E10.2a 5891932 5892221 1
CDS:F49E10.2a 5892272 5892816 1
CDS:F49E10.2a 5892861 5892948 1
CDS:F49E10.2a 5893005 5893083 1
CDS:F49E10.2a 5893137 5893458 1
CDS:F49E10.2a 5893506 5893672 1
CDS:F49E10.2a 5893722 5893898 1

1 Sequence

Length
2373

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E10.2a.1 F49E10.2a.1 2424   X: 5890406-5893898