WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H6.5c.1 Sequence Name  T07H6.5c.1
Length (nt)  1881   Chromosome Location  X: 6286129-6291527
Chromosome . Primary Identifier  X Chromosome Location . Start  6286129
Chromosome Location . End  6291527 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H6.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002976 lev-9 T07H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H6.5c T07H6.5c 1881   X: 6286129-6286149

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.5c.1 6286129 6291527 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236332   21   X: 6286129-6286149 Caenorhabditis elegans
Exon236336   95   X: 6286549-6286643 Caenorhabditis elegans
Exon236339   156   X: 6286689-6286844 Caenorhabditis elegans
Exon236342   159   X: 6286887-6287045 Caenorhabditis elegans
Exon236345   183   X: 6288821-6289003 Caenorhabditis elegans
Exon236348   105   X: 6289051-6289155 Caenorhabditis elegans
Exon236351   161   X: 6289200-6289360 Caenorhabditis elegans
Exon236354   259   X: 6289415-6289673 Caenorhabditis elegans
Exon236357   174   X: 6290051-6290224 Caenorhabditis elegans
Exon236360   76   X: 6290294-6290369 Caenorhabditis elegans
Exon236363   128   X: 6290422-6290549 Caenorhabditis elegans
Exon236366   183   X: 6291099-6291281 Caenorhabditis elegans
Exon236367   181   X: 6291347-6291527 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.5c.1 6286129 6291527 -1

1 Sequence

Length
1881

1 Sequence Ontology Term

Identifier Name Description
transcript