WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56E10.3a.1 Sequence Name  C56E10.3a.1
Length (nt)  1988   Chromosome Location  X: 6645654-6651767
Chromosome . Primary Identifier  X Chromosome Location . Start  6645654
Chromosome Location . End  6651767 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016976 C56E10.3 C56E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56E10.3a C56E10.3a 1908   X: 6645664-6645774

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56E10.3a.1 6645654 6651767 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237378   121   X: 6645654-6645774 Caenorhabditis elegans
Exon237379   120   X: 6645848-6645967 Caenorhabditis elegans
Exon237380   196   X: 6646988-6647183 Caenorhabditis elegans
Exon237382   110   X: 6647440-6647549 Caenorhabditis elegans
Exon237384   76   X: 6647943-6648018 Caenorhabditis elegans
Exon237386   101   X: 6648141-6648241 Caenorhabditis elegans
Exon237388   150   X: 6648523-6648672 Caenorhabditis elegans
Exon237390   107   X: 6648728-6648834 Caenorhabditis elegans
Exon237392   103   X: 6648879-6648981 Caenorhabditis elegans
Exon237394   114   X: 6649027-6649140 Caenorhabditis elegans
Exon237396   138   X: 6649505-6649642 Caenorhabditis elegans
Exon237398   129   X: 6650545-6650673 Caenorhabditis elegans
Exon237400   171   X: 6650727-6650897 Caenorhabditis elegans
Exon237402   151   X: 6651369-6651519 Caenorhabditis elegans
Exon237405   201   X: 6651567-6651767 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56E10.3a.1 6645654 6651767 1

1 Sequence

Length
1988

1 Sequence Ontology Term

Identifier Name Description
transcript