WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56E10.3a Sequence Name  C56E10.3a
Length (nt)  1908   Chromosome Location  X: 6645664-6645774
Chromosome . Primary Identifier  X Chromosome Location . Start  6645664
Chromosome Location . End  6645774
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E10.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53456 C56E10.3, isoform a 73.5 635 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00043273
WBRNAi00043274
WBRNAi00012463
WBRNAi00012464
WBRNAi00076248
WBRNAi00030202
WBRNAi00023105
WBRNAi00023176
WBRNAi00023688
WBRNAi00023976

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C56E10.3a 6645664 6645774 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016976 C56E10.3 C56E10.3 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C56E10.3a 6645664 6645774 1
CDS:C56E10.3a 6645848 6645967 1
CDS:C56E10.3a 6646988 6647183 1
CDS:C56E10.3a 6647440 6647549 1
CDS:C56E10.3a 6647943 6648018 1
CDS:C56E10.3a 6648141 6648241 1
CDS:C56E10.3a 6648523 6648672 1
CDS:C56E10.3a 6648728 6648834 1
CDS:C56E10.3a 6648879 6648981 1
CDS:C56E10.3a 6649027 6649140 1
CDS:C56E10.3a 6649505 6649642 1
CDS:C56E10.3a 6650545 6650673 1
CDS:C56E10.3a 6650727 6650897 1
CDS:C56E10.3a 6651369 6651519 1
CDS:C56E10.3a 6651567 6651697 1

1 Sequence

Length
1908

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56E10.3a.1 C56E10.3a.1 1988   X: 6645654-6651767