WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54D1.5 Sequence Name  C54D1.5
Length (nt)  4902   Chromosome Location  X: 7144934-7145017
Chromosome . Primary Identifier  X Chromosome Location . Start  7144934
Chromosome Location . End  7145017
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45033 LAM-2 181.2 1633 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00093778
WBRNAi00067012
WBRNAi00067087
WBRNAi00067143
WBRNAi00067170
WBRNAi00067224
WBRNAi00067316
WBRNAi00067506
WBRNAi00067591
WBRNAi00067601
WBRNAi00024902
WBRNAi00043131
WBRNAi00008553
WBRNAi00099915
WBRNAi00100382
WBRNAi00085391
WBRNAi00093781
WBRNAi00100756
WBRNAi00099309
WBRNAi00099511
WBRNAi00099713
WBRNAi00101103
WBRNAi00111634
WBRNAi00078048
WBRNAi00000593
WBRNAi00100008
WBRNAi00100195
WBRNAi00086104
WBRNAi00086106
WBRNAi00086105

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54D1.5 7144934 7145017 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016913 lam-2 C54D1.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54D1.5 7144934 7145017 -1
CDS:C54D1.5 7145067 7145248 -1
CDS:C54D1.5 7145300 7146625 -1
CDS:C54D1.5 7146677 7148187 -1
CDS:C54D1.5 7148238 7148693 -1
CDS:C54D1.5 7148740 7148861 -1
CDS:C54D1.5 7148908 7149092 -1
CDS:C54D1.5 7149144 7149322 -1
CDS:C54D1.5 7149375 7149689 -1
CDS:C54D1.5 7149734 7149851 -1
CDS:C54D1.5 7149899 7150025 -1
CDS:C54D1.5 7150890 7151186 -1

1 Sequence

Length
4902

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54D1.5.1 C54D1.5.1 6043   X: 7143846-7151239