WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54D1.6 Sequence Name  C54D1.6
Length (nt)  2436   Chromosome Location  X: 7166152-7166387
Chromosome . Primary Identifier  X Chromosome Location . Start  7166152
Chromosome Location . End  7166387
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08973 BAR-1 92.2 811 Caenorhabditis elegans
 

Other

65 RNAi

WormBase ID
WBRNAi00101812
WBRNAi00101813
WBRNAi00101386
WBRNAi00101392
WBRNAi00101363
WBRNAi00101365
WBRNAi00066967
WBRNAi00066979
WBRNAi00067124
WBRNAi00067391
WBRNAi00067512
WBRNAi00067581
WBRNAi00067639
WBRNAi00067818
WBRNAi00043132
WBRNAi00024903
WBRNAi00008554
WBRNAi00097720
WBRNAi00099916
WBRNAi00071876
WBRNAi00101459
WBRNAi00100757
WBRNAi00099310
WBRNAi00071621
WBRNAi00099714
WBRNAi00101710
WBRNAi00099512
WBRNAi00101104
WBRNAi00088907
WBRNAi00087089

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54D1.6 7166152 7166387 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54D1.6 7166152 7166387 -1
CDS:C54D1.6 7167038 7167194 -1
CDS:C54D1.6 7167241 7167329 -1
CDS:C54D1.6 7167374 7167605 -1
CDS:C54D1.6 7167649 7167744 -1
CDS:C54D1.6 7167791 7167916 -1
CDS:C54D1.6 7167965 7168108 -1
CDS:C54D1.6 7168152 7168265 -1
CDS:C54D1.6 7168311 7168556 -1
CDS:C54D1.6 7168604 7168816 -1
CDS:C54D1.6 7168871 7168985 -1
CDS:C54D1.6 7169034 7169158 -1
CDS:C54D1.6 7169205 7169351 -1
CDS:C54D1.6 7169985 7170089 -1
CDS:C54D1.6 7170147 7170242 -1
CDS:C54D1.6 7170308 7170434 -1
CDS:C54D1.6 7170549 7170616 -1

1 Sequence

Length
2436

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54D1.6.1 C54D1.6.1 2592   X: 7166005-7170625