WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.1.2 Sequence Name  F48E3.1.2
Length (nt)  1787   Chromosome Location  X: 7486004-7489876
Chromosome . Primary Identifier  X Chromosome Location . Start  7486004
Chromosome Location . End  7489876 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.1 F48E3.1 1404   X: 7486172-7486294

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.2 7486004 7489876 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239589   291   X: 7486004-7486294 Caenorhabditis elegans
Exon239592   63   X: 7486347-7486409 Caenorhabditis elegans
Exon239595   95   X: 7486479-7486573 Caenorhabditis elegans
Exon239598   118   X: 7486625-7486742 Caenorhabditis elegans
Exon239601   118   X: 7486792-7486909 Caenorhabditis elegans
Exon239604   79   X: 7486973-7487051 Caenorhabditis elegans
Exon239607   264   X: 7487627-7487890 Caenorhabditis elegans
Exon239610   124   X: 7488056-7488179 Caenorhabditis elegans
Exon239613   59   X: 7488228-7488286 Caenorhabditis elegans
Exon239616   70   X: 7488327-7488396 Caenorhabditis elegans
Exon239619   185   X: 7488440-7488624 Caenorhabditis elegans
Exon239622   119   X: 7488670-7488788 Caenorhabditis elegans
Exon239626   202   X: 7489675-7489876 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.2 7486004 7489876 1

1 Sequence

Length
1787

1 Sequence Ontology Term

Identifier Name Description
transcript