WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M60.5.1 Sequence Name  M60.5.1
Length (nt)  2305   Chromosome Location  X: 8243131-8246369
Chromosome . Primary Identifier  X Chromosome Location . Start  8243131
Chromosome Location . End  8246369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M60.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002234 kqt-2 M60.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M60.5 M60.5 2088   X: 8243348-8243516

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M60.5.1 8243131 8246369 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241756   386   X: 8243131-8243516 Caenorhabditis elegans
Exon241757   266   X: 8243570-8243835 Caenorhabditis elegans
Exon241758   89   X: 8243884-8243972 Caenorhabditis elegans
Exon241759   142   X: 8244059-8244200 Caenorhabditis elegans
Exon241760   60   X: 8244244-8244303 Caenorhabditis elegans
Exon241761   151   X: 8244348-8244498 Caenorhabditis elegans
Exon241762   229   X: 8244548-8244776 Caenorhabditis elegans
Exon241763   171   X: 8245063-8245233 Caenorhabditis elegans
Exon241764   134   X: 8245279-8245412 Caenorhabditis elegans
Exon241765   74   X: 8245477-8245550 Caenorhabditis elegans
Exon241766   131   X: 8245628-8245758 Caenorhabditis elegans
Exon241767   177   X: 8245804-8245980 Caenorhabditis elegans
Exon241768   80   X: 8246027-8246106 Caenorhabditis elegans
Exon241769   215   X: 8246155-8246369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M60.5.1 8243131 8246369 -1

1 Sequence

Length
2305

1 Sequence Ontology Term

Identifier Name Description
transcript