WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M60.5 Sequence Name  M60.5
Length (nt)  2088   Chromosome Location  X: 8243348-8243516
Chromosome . Primary Identifier  X Chromosome Location . Start  8243348
Chromosome Location . End  8243516
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M60.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46886 KQT-2 80.1 695 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000528
WBRNAi00051041
WBRNAi00051042
WBRNAi00017262

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M60.5 8243348 8243516 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002234 kqt-2 M60.5 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:M60.5 8243348 8243516 -1
CDS:M60.5 8243570 8243835 -1
CDS:M60.5 8243884 8243972 -1
CDS:M60.5 8244059 8244200 -1
CDS:M60.5 8244244 8244303 -1
CDS:M60.5 8244348 8244498 -1
CDS:M60.5 8244548 8244776 -1
CDS:M60.5 8245063 8245233 -1
CDS:M60.5 8245279 8245412 -1
CDS:M60.5 8245477 8245550 -1
CDS:M60.5 8245628 8245758 -1
CDS:M60.5 8245804 8245980 -1
CDS:M60.5 8246027 8246106 -1
CDS:M60.5 8246155 8246369 -1

1 Sequence

Length
2088

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M60.5.1 M60.5.1 2305   X: 8243131-8246369