WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B9.5.1 Sequence Name  F13B9.5.1
Length (nt)  2610   Chromosome Location  X: 8275169-8283301
Chromosome . Primary Identifier  X Chromosome Location . Start  8275169
Chromosome Location . End  8283301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002239 ksr-1 F13B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B9.5 F13B9.5 2316   X: 8275219-8275324

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13B9.5.1 8275169 8283301 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241810   156   X: 8275169-8275324 Caenorhabditis elegans
Exon241811   71   X: 8275367-8275437 Caenorhabditis elegans
Exon241812   177   X: 8276079-8276255 Caenorhabditis elegans
Exon241813   91   X: 8277410-8277500 Caenorhabditis elegans
Exon241814   147   X: 8278499-8278645 Caenorhabditis elegans
Exon241815   169   X: 8279494-8279662 Caenorhabditis elegans
Exon241816   106   X: 8279738-8279843 Caenorhabditis elegans
Exon241817   145   X: 8279892-8280036 Caenorhabditis elegans
Exon241818   371   X: 8280256-8280626 Caenorhabditis elegans
Exon241819   201   X: 8281724-8281924 Caenorhabditis elegans
Exon241820   311   X: 8282184-8282494 Caenorhabditis elegans
Exon241821   138   X: 8282544-8282681 Caenorhabditis elegans
Exon241822   130   X: 8282730-8282859 Caenorhabditis elegans
Exon241823   397   X: 8282905-8283301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13B9.5.1 8275169 8283301 1

1 Sequence

Length
2610

1 Sequence Ontology Term

Identifier Name Description
transcript