WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G8.1.1 Sequence Name  F35G8.1.1
Length (nt)  1371   Chromosome Location  X: 9315436-9319180
Chromosome . Primary Identifier  X Chromosome Location . Start  9315436
Chromosome Location . End  9319180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018067 npr-7 F35G8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G8.1 F35G8.1 1143   X: 9315664-9315772

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G8.1.1 9315436 9319180 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244266   337   X: 9315436-9315772 Caenorhabditis elegans
Exon244267   80   X: 9315819-9315898 Caenorhabditis elegans
Exon244268   129   X: 9315954-9316082 Caenorhabditis elegans
Exon244269   139   X: 9316283-9316421 Caenorhabditis elegans
Exon244270   173   X: 9317086-9317258 Caenorhabditis elegans
Exon244271   103   X: 9318153-9318255 Caenorhabditis elegans
Exon244272   197   X: 9318311-9318507 Caenorhabditis elegans
Exon244273   137   X: 9318920-9319056 Caenorhabditis elegans
Exon244274   76   X: 9319105-9319180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G8.1.1 9315436 9319180 -1

1 Sequence

Length
1371

1 Sequence Ontology Term

Identifier Name Description
transcript