WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1g.2 Sequence Name  C23F12.1g.2
Length (nt)  8723   Chromosome Location  X: 9405289-9427247
Chromosome . Primary Identifier  X Chromosome Location . Start  9405289
Chromosome Location . End  9427247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1g.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1g C23F12.1g 5670   X: 9417087-9418554

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.2 9405289 9427247 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244529   191   X: 9405289-9405479 Caenorhabditis elegans
Exon244545   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244558   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244571   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244585   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244600   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244615   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244628   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244648   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244669   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244691   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244715   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244741   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244765   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244791   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244817   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244845   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244871   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244889   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244919   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244948   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244977   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245006   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245035   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245064   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245093   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245122   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245151   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245228   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245257   177   X: 9424224-9424400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.2 9405289 9427247 1

1 Sequence

Length
8723

1 Sequence Ontology Term

Identifier Name Description
transcript